The INDIVIDUALIST

A Wiki about biochemical individuality

Glycomics

See Also

Description

The major sialoglycoprotein of the human erythrocyte membrane. It consists of at least two sialoglycopeptides and is composed of 60% carbohydrate including sialic acid and 40% protein. It is involved in a number of different biological activities including the binding of MN Blood Group, influenza viruses, kidney bean phytohemagglutinin, and wheat germ agglutinin.

Glycophorin A

Glycophorin A is a [Glycoprotiens? glycoprotein] that spans the plasma membrane (lipid bilayer) of human red blood cells. Each RBC has some 500,000 copies of the molecule embedded in its plasma membrane.

Two polymorphic versions of glycophorin A, which differ only at residues 1 and 5, occur in humans. These give rise to the MN blood groups:

  • The M allele encodes Ser at position 1 (Ser-1) and Gly at position 5 (Gly-5)
  • The N allele encodes Leu-1 and Glu-5
  • Individuals who inherit two N alleles have blood group N.
  • Individuals who are homozygous for the M allele have blood group M.
  • Heterozygous individuals produce both proteins and have blood group MN.

Glycophorin A is the most important attachment site by which the parasite Plasmodium falciparum invades human red blood cells.

Glycophorins C and D

Glycophorin C and D encode the Gerbich (Ge) antigens which were described in 1960 and are named after one of the three original patients. There are four allelles, Ge-1 to Ge-4. Three types of Ge antigen negativity are known: Ge-1,-2,-3 (Leach phenotype), Ge-2,-3 and Ge-2,+3. A 3.4 kilobase pair deletion within the gene, which probably arose because of unequal crossing over between the two repeated domains, is responsible for the formation of the Ge-2,-3 genotype. The breakpoints of the deletion are located within introns 2 and 3 and results in the deletion of exon 3.

Glycophorin C (GYPC; CD236/CD236R; glycoprotein beta; glycoconnectin; PAS-2') is an integral membrane protein of the erythrocyte and acts as the receptor for the Plasmodium falciparum protein PfEBP-2 (erythrocyte binding protein 2; baebl; EBA-140).[1]

Other database IDs and links

NCBI genes

Uniprot ID

Genbank proteins

Gene nomenclature database ID

Genbank nucleic acids

NCBI homologenes for homologs and orthologs

NCBI dbSNP for single nucleotide polymorphisms

HGMD ID - at the Human Gene Mutation Database

OMIM ID - at Online Mendelian Inheritance in Man

Attribution

  • This article is licensed under the GNU Free Documentation License. Sections excerpted from Blood Group Antigen Gene Mutation Database. See: Blumenfeld OO, Patnaik SK. Allelic genes of blood group antigens: a source of human mutations and cSNPs documented in the Blood Group Antigen Gene Mutation Database. Human Mutation. 2004 Jan; 23(1):8-16. PubMed ID: 14695527
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